TRR 175 The Green Hub - Central Coordinator of Acclimation in Plants
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Publications

2024

  • Ostermeier M, Garibay-Hernández A, Holzer V, Sch-roda M, Nickelsen J (2024) Structure, biogenesis and evo-lution of thylakoid membranes. Plant Cell in press.
  • Kunz HH, Armbruster U, Mühlbauer S (2024) Chloroplast ion homeostasis – what do we know and where should we go? New Phytol in press.
  • Tang Q, Xu D, Lenzen B, Brachmann A, Yapa MM, Doroodian P, Schmitz-Linneweber C, Masuda T, Hua Z, Leister D, Kleine T (2024) Arabidopsis GENOMES UNCOUPLED PROTEIN1 binds to plastid RNAs and promotes their maturation. bioRxiv 2024.02.08.579428 doi: doi.org/10.1101/2024.02.08.579428.
  • Muino JM, Großmann C, Kleine T, Kaufmann K (2024) Natural genetic variation in GLK1-mediated photosynthetic acclimation in response to light. BMC Plant Biol 24:87 doi: 10.1186/s12870-024-04741-1.
  • Venn B, Leifeld T, Zhang P, Mühlhaus T (2024) Temporal classification of short time series data. BMC Bioinformatics 1. doi.org/10.1186/s12859-024-05636-6.
  • Murik O, Geffen O, Shotland Y, Fernandez-Pozo N, Ullrich KK, Walther D, Rensing SA, Treves H (2024) Genomic imprints of unparalleled growth. New Phytol 241: 1144-1160 doi.org/10.1111/nph.19444.
  • John A, Krämer M, Lehmann, M, Kunz HH, Aarabi F, Alseekh S, Fernie A, Sommer F, Schroda M, Zimmer D, Mühlhaus T, Peisker H, Gutbrod K, Dörmann P, Neunzig J, Philippar K, Neuhaus HE (2024) Degradation of FATTY ACID EXPORT PROTEIN1 by RHOMBOID-LIKE PROTEASE11 contributes to cold tolerance in Arabidopsis. Plant Cell doi: 10.1093/plcell/koae011/7577599.

2023

  • Hernandez JS, Dziubek D, Schröder L, Seydel C, Kitashova A, Brodsky V, Nägele T (2023) Natural variation of temperature acclimation of Arabidopsis thaliana. Physiol Plant 175: e14106. doi: 10.1111/ppl.14106.
  • Knoblauch J, Waadt R, Cousins AB, Kunz HH (2023) Probing the in situ volumes of Arabidopsis leaf plastids using three‐dimensional confocal and scanning electron microscopy. Plant J 117:332-341. doi: 10.1111/tpj.16554
  • Niemeyer J, Fischer L, Aylward FO, Schroda M (2023) Analysis of viral promoters for transgene expression and of the effect of 5'-UTRs on alternative translational start sites in Chlamydomonas. Genes 14: 948 doi: 10.3390/genes14040948
  • Bohle F, Ross J, Tamanna S, Jansohn H, Schlosser M, Reinhardt F, Brox A, Bethmann S, Kopriva S, Trentmann O, Jahns P, Deponte M, Schwarzländer M, Trost P, Zaffagnini M, Meyer AJ, Müller-Schüssele SJ (2023). Chloroplasts lacking class I glutaredoxins are functional but show a delayed recovery of protein cysteinyl redox state after oxidative challenge. Redox Biology 69: 103015 doi.org/10.1016/j.redox.2023.103015.
  • Bauer K, Nayem S, Lehmann M, Wenig M, Shu L-J, Ranf S, Geigenberger P, Vlot AC (2023) ß-D-XYLOSIDASE 4 modulates systemic immune signaling in Arabidopsis thaliana. Front Plant Sci 13: 109800 10.3389/fpls.2022.1096800
  • Küken A, Treves H, Nikoloski Z. A simulation-free constrained regression approach for flux estimation in isotopically nonstationary metabolic flux analysis with applications in microalgae (2023) Front Plant Sci 14: 1140829. doi: 10.3389/fpls.2023.1140829.
  • Munio JM, Grossmann C, Kleine T, Kaufmann K (2023) Natural genetic variation in GLK1-mediated photosynthetic acclimation in response to light. bioRxiv 10.1101/2023.10.25.563914.
  • Leister D, Abdel-Salam E, Figueroa Gonzalez T (2023) Transcriptomic meta-analysis and functional validation identify genes linked to adaptation and involved in high-light acclimation in Synechocystis sp. PCC 6803. Front Photobiol doi: 10.3389/fphbi.2023.1290382.
  • Atanasov V, Schumacher J, Muino J, Larasati C, Wang L, Kaufmann K, Leister D, Kleine T (2023) Arabidopsis BBX14 is involved in high light acclimation and seedling development. Plant J doi: 10.1111/tpj.16597.
  • Dayou O, Brun G, Gennat C, Wicke S (2023) Acclimation kinetics of the holoparasitic weed Phelipanche ramosa (Orobanchaceae) under excessive light and heat conditions. bioRxiv. doi: 10.1101/2023.11.30.569309.
  • Lenzen B, Roesch F, Ruwe Hannes, Legen J, Small ID, Schmitz-Linneweber C (2023) A Role for chloroplast RNA binding protein CP29A in rbcL expression during cold acclimation. bioRxiv doi:10.1101/2023.11.24.568587.
  • Muino JM, Qu Y, Ruwe H, Maschmann S, Chen W, Zoschke R, Ohler U, Kaufmann K, Schmitz-Linneweber C (2023) MatK impacts Differential Chloroplast Translation of Ribosomal and Photosynthetic genes by limiting spliced tRNA-K(UUU) abundance. bioRxiv doi:10.1101/2023.10.25.563914.
  • Penzler J-F, Kleine T, Leister D (2023) COG1 – a master transcription factor for regulating photosynthesis. Mol Plant 18: 1674-2052 doi: 10.1016/j.molp.2023.11.006.
  • Schwenkert S, Leister D, Lo WT (2023) Hidden keyholders – exploring metabolite transport across the outer chloroplast membrane. J Mit Plast Endo doi.org/10.1080/28347056.2023.2247168.
  • Arabi F, Fernie AR (2023) Ascorbate triggers the switch between cell devision and cell differentiation in the Arabidopsis tapetum. J Plant Physiol doi: 10.1016/j.jplph.2023.154058.
  • Aarabi F, Salem MA, Arrivault S, Bulut M, Schöttler MA, Giavalisco P, Fernie AR, Hoefgen R (2023) The regulation of sulfolipids under sulfur starvation. Plant Mol Biol 112: 195-198 doi: 10.1007/s11103-023-01364-2.
  • Jung F, Frey K, Zimmer D, Mühlhaus T (2023) DeepSTABp: A Deep Learning Approach for the Prediction of Thermal Protein Stability.Int J Mol Sci doi:10.3390/ijms24087444.
  • Weil HL, Schneider K, Tschöpe M, Bauer J, Maus O, Frey K, Brilhaus D, Martins Rodrigues C, Doniparthi G, Wetzels F, Lukasczyk J, Kranz A, Grüning B, Zimmer D, Deßloch S, Suchodoletz D von, Usadel B, Garth C, Mühlhaus T (2023) PLANTdataHUB: a collaborative platform for continuous FAIR data sharing in plant research. Plant J doi:10.1111/tpj.16474.
  • Arend M, Zimmer D, Xu R, Sommer F, Mühlhaus T, Nikoloski Z (2023) Proteomics and constraint-based modelling reveal enzyme kinetic properties of Chlamydomonas reinhardtii on a genome scale. Nat Commun doi: 10.1038/s41467-023-40498-1.
  • Zhang N, Venn B, Bailey CE, Xia M, Mattoon EM, Mühlhaus T, Zhang R (2023) Moderate High Temperature is Beneficial or Detrimental Depending on Carbon Availability in the Green Alga Chlamydomonas reinhardtii. J Exp Bot doi: 10.1093/jxb/erad405.
  • Espinoza-Corral R, Schwenkert S, Schneider A (2023) Characterization of the preferred cation cofactors of chloroplast protein kinases in Arabidopsis thaliana. FEBS Open Bio 13: 511-518 doi: 10.1002/2211-5463.13563.
  • Dischinger A, Schwenkert S (2023) Chloroplast envelope membrane subfractionation from Arabidopsis and Pea. Methods Mol Biol 2581: 267-284 doi: 10.1007/978-1-0716-2784-6_19.
  • Dziubek D, Poeker L, Siemiatkoska B, Graf A, Mari no G, Alseekh S, Arrivault S, Fernie AR, Armbruster U, Geigenberger P (2023) NTRC and thioredoxins m1/m2 underpin the light acclimation of plants on proteome and metabolome levels. Plant Physiol 194: 982-1005 doi: 10.1093/plphys/kiad535.
  • Okooboh GO, Haferkamp I, Rühle T, Leister D, Neuhaus H E (2023) Expression of the plastocyanin gene PETE2 in Camelina sativa improves seed yield and salt tolerance. J Plant Physiol 290: 154103. doi: 10.1016/j.jplph.2023.154103.
  • Zirngibl ME, Araguirang GE, Kitashova A, Jahnke K, Rolka T, Kuhn C, Nägele T, Richter AS (2023) Triose phosphate export from chloroplasts and cellular sugar content regulate anthocyanin biosynthesis during high light acclimation. Plant Commun 4: 100423 doi: 10.1016/j.xplc.2022.100423
  • Schwenkert S, Lo WT, Szulc B, Yip CK, Pratt AI, Cusack SA, Brandt B, Leister D, Kunz HH (2023) Probing the physiological role of the plastid outer-envelope membrane using the oemiR plasmid collection. G3 (Bethesda) 13: jkad187. doi: 10.1093/g3journal/jkad187.
  • Kitashova A, Adler SO, Richter AS, Eberlein S, Dziubek D, Klipp E, Nägele T (2023) Limitation of sucrose biosynthesis shapes carbon partitioning during plant cold acclimation. Plant Cell Environ 46: 464-478 doi: 10.1111/pce.14483. 
  • Bellin L, Garza Amaya DL, Scherer V, Pruss T, John A, Richter A, Mohlmann T (2023) Nucleotide Imbalance, Provoked by Downregulation of Aspartate Transcarbamoylase Impairs Cold Acclimation in Arabidopsis. Molecules 28: 1585 doi: 10.3390/molecules28041585.
  • Ji S, Grimm B, Wang P (2023) Chloroplast SRP43 and SRP54 independently promote thermostability and membrane binding of light-dependent protochlorophyllide oxidoreductases. Plant J  115: 1583-1598 doi: 10.1111/tpj.16339.
  • Sun T, Wang P, Rao S, Zhou X, Wrightstone E, Lu S, Yuan H, Yang Y, Fish T, Thannhauser T, Liu J, Mazourek M, Grimm B, Li L (2023) Co-chaperoning of chlorophyll and carotenoid biosynthesis by ORANGE family proteins in plants. Mol Plant 16: 1048-1065 doi: 10.1016/j.molp.2023.05.006. 
  • Fan T, Roling L, Hedtke B, Grimm B (2023) FC2 stabilizes POR and suppresses ALA formation in the tetrapyrrole biosynthesis pathway. New Phytol 239: 624-638. doi: 10.1111/nph.18952.
  • Kitashova A, Brodsky V, Chaturvedi P, Pierides I, Ghatak A, Weckwerth W, Nägele T (2023) Quantifying the impact of dynamic plant-environment interactions on metabolic regulation. J Plant Physiol 290: 154116 doi: 10.1016/j.jplph.2023.154116.
  • Leister D (2023) Enhancing the light reactions of photosynthesis: Strategies, controversies, and perspectives. Mol Plant, 16: 4-22 doi: 10.1016/j.molp.2022.08.005.
  • Leister D, Sharma A, Kerber N, Nägele T, Reiter B, Pasch V, Beeh S, Jahns P, Barbato R, Pribil M, Rühle T (2023) An ancient metabolite damage-repair system sustains photosynthesis in plants. Nat Commun 14: 3023 doi: 10.1038/s41467-023-38804-y.
  • Xu D, Tang Q, Xu P, Schaffner AR, Leister D, Kleine T (2023) Response of the organellar and nuclear (post)transcriptomes of Arabidopsis to drought. Front Plant Sci 14: 1220928 doi: 10.3389/fpls.2023.1220928.
  • Teh JT, Leitz V, Holzer VJC, Neusius D, Marino G, Meitzel T, Garcia-Cerdan, JG, Dent RM, Niyogi KK, Geigenberger P, Nickelsen J (2023) NTRC regulates CP12 to activate Calvin-Benson cycle during cold acclimation. Proc Natl Acad Sci USA 120: e2306338120 doi: 10.1073/pnas.2306338120.
  • Bohne AV, Nickelsen J (2023) Control of organellar gene expression by nucleus-encoded proteins. In: Grossman A, Wollman FA (eds) The Chlamydomonas Sourcebook Vol. 2 (3rd edition). Acad Press 443-466 doi: 10.1016/B978-0-12-821430-5.00013-4.
  • Ries F, Weil HL, Herkt C, Mühlhaus T, Sommer F, Schroda M, Willmund F (2023) Competition co-immunoprecipitation reveals the interactors of the chloroplast CPN60 chaperonin machinery. Plant Cell Environ 46: 3371-3391 doi: 10.1111/pce.14697.
  • Willmund F, Hauser C, Zerges W (2023) Chapter 24 – Translation and protein synthesis in the chloroplast. In  Grossman,Wollman FA (eds) The Chlamydomonas Sourcebook Vol. 2 (3rd edtion Acad Press 467-508 doi: 10.1016/B978-0-12-821430-5.00014-6
  • Aarabi F, Fernie AR (2023) Elucidating the role of ascorbate in light signaling. Trends Plant Sci 28: 978-980 doi: 10.1016/j.tplants.2023.05.007.
  • Aarabi F, Ghigi A, Wijesingha Ahchige M, Bulut M, Geigenberger P, Neuhaus HE, Sampathkumar A, Alseekh S, Fernie AR (2023) Genome-Wide Association Study unveils ascorbate regulation by PAS/LOV PROTEIN during high light acclimation. Plant Physiol 193: 2037-2054 doi: 10.1093/plphys/kiad323.
  • Vicente AM, Manavski N, Rohn PT, Schmid LM, Garcia-Molina A, Leister D, Seydel C, Bellin L, Möhlmann T, Ammann G, Kaiser S, Meurer J (2023) The plant cytosolic m6A RNA methylome stabilizes photosynthesis in the cold. Plant Commun 4: 100634 doi: 10.1016/j.xplc.2023.100634.
  • Bellin L, Melzer M, Hilo A, Amaya DLG, Keller I, Meurer J, Möhlmann T (2023) Nucleotide limitation results in impaired photosynthesis, reduced growth and seed yield together with massively altered gene expression Plant Cell Physiol pcad063.
  • Schmid LM, Manavski N, Chi W, Meurer J. (2023) Chloroplast Ribosome Biogenesis Factors. Plant Cell Physiol 27: pcad082 doi: 10.1093/pcp/pcad082.
  • Ji D, Luo M, Guo Y, Li Q, Kong L, Ge H, Wang Q, Song Q, Zeng X, Ma J, Wang Y, Meurer J, Chi W (2023) Efficient scavenging of reactive carbonyl species in chloroplasts is required for light acclimation and fitness of plants. New Phytol 240: 676-693 doi: 10.1111/nph.19156
  • Legen J, Dühnen S, Gauert A, Götz M, Schmitz-Linneweber C (2023) A CRR2-Dependent sRNA Sequence Supports Papillomavirus Vaccine Expression in Tobacco Chloroplasts. Metabolites 13: 315 doi: 10.3390/metabo13030315.
  • Small I, Melonek J, Bohne AV, Nickelsen J, Schmitz-Linneweber C (2023) Plant Organellar RNA Maturation. Plant Cell 35:1727-1751doi: 10.1093/plcell/koad049.
  • Smirnova J, Loerke J, Kleinau G, Schmidt A, Bürger J, Meyer EH, Mielke T, Scheerer P, Bock R, Spahn CMT,  Zoschke, R (2023) Structure of the actively translating plant 80S ribosome at 2.2 Å resolution. Nat Plants 9:  987-1000 doi: 10.1038/s41477-023-01407-y.
  • Lohmann J, de Luxán-Hernández C, Gao Y, Zoschke R, Weingartner M (2023) The Arabidopsis translation factor eEF1Bγ impacts plant development and associates with heat-induced cytoplasmic foci. J Exp Bot 74: 2585-2602 doi: 10.1093/jxb/erad050.
  • Ghandour R, Gao Y, Laskowski J, Barahimipour R, Ruf S, Bock R, Zoschke R (2023) Transgene insertion into the plastid genome alters expression of adjacent native chloroplast genes at the transcriptional and translational levels. Plant Biotechnol J 21: 711-725 doi: 10.1111/pbi.13985.
  • Guo WJ, Pommerrenig B, Neuhaus HE, Keller I (2023) Interaction between sugar transport and plant development. Plant Physiol 288: 154073 doi: 10.1016/j.jplph.2023.154073.
  • Weiszmann J, Walther D, Clauw P, Back G, Gunis J, Reichardt I, Koemeda S, Jez J, Nordborg M, Schwarzerova J, Pierides I, Nägele T, Weckwerth W (2023) Metabolome plasticity in 241 Arabidopsis thaliana accessions reveals evolutionary cold adaptation processes. Plant Physiol 193: 980-1000 doi: 10.1093/plphys/kiad298.
  • Khan A, Cheng J, Kitashova A, Fürtauer L, Nägele T, Picco C, Scholz-Starke J, Keller I, Neuhaus HE, Pommerrenig B (2023) The vacuolar sugar transporter EARLY RESPONSE TO DEHYDRATION 6-LIKE4 influences fructose signaling and plant growth. Plant Physiol 193: 2141-2163 doi: 10.1093/plphys/kiad403.
  • Valifard M, Fernie AL, Kitashova A, Nägele T, Schröder R, Meinert M, Pommerrenig B, Mehner-Breitfeld D, Witte C-P, Brüser T, Keller I, Neuhaus HE (2023) The novel chloroplast glucose transporter pGlcT2 affects adaptation to extended light periods. J Biol Chem 299: 104741 doi: 10.1016/j.jbc.2023.104741.
  • Kreis E, Niemeyer J, Merz M, Scheuring D, Schroda M (2023) CLPB3 is required for the removal of chloroplast protein aggregates and for thermotolerance in Chlamydomonas. J Exp Bot 74: 3714-3728 doi: 10.1093/jxb/erad109.
  • Wang F, Dischinger K, Westrich LD, Meindl I, Egidi F, Trosch R, Sommer F, Johnson X, Schroda M, Nickelsen J, Willmund F, Vallon O, Bohne AV (2023) One-helix protein 2 is not required for the synthesis of photosystem II subunit D1 in Chlamydomonas. Plant Physiol 191: 1612-1633 doi: 10.1093/plphys/kiad015.
  • Richter AS, Nägele T, Grimm B, Kaufmann K, Schroda M, Leister D, Kleine T (2023) Retrograde signaling in plants: A critical review focusing on the GUN pathway and beyond. Plant Commun 4: 100511 doi: 10.1016/j.xplc.2022.100511.
  • Schroda M, deVitry C (2023) Chapter 20 - Molecular chaperones, proteases, and unfolded protein responses. In A. R. Grossman & F.-A. Wollman (Eds.), The Chlamydomonas Sourcebook (Third Edition) (pp. 647-689). London: Academic Press.
  • Leister D (2023) Photobiology: introduction, overview and challenges. Front Photobiol doi: 10.3389/fphbi.2023.1253330.
  • Araguirang GE, Venn B, Kelber N-M, Feil R, Lunn J, Kleine T, Leister D, Mühlhaus T, Richter AS (2023) Spliceosomal complex components are critical for adjusting the C: N balance during high-light acclimation. bioRxiv: 2023.2007.2019.549727 doi: 10.1101/2023.07.19.549727.
  • Scherer V, Bellin L, Schwenkert S, Lehmann M, Rinne J, Witte C-P, Jahnke K, Richter A, Pruss T, Lau A, Leister D, Möhlmann T (2023) UPP affects chloroplast development by interfering with chloroplast proteostasis. bioRxiv: 2023.2008.2028.555145 doi: 10.1101/2023.08.28.555145.

2022

  • Araguirang GE, Richter AS (2022) Activation of anthocyanin biosynthesis in high light - what is the initial signal? New Phytol 236: 2037-2043  doi: 10.1111/nph.18488.
  • Leister D, Marino G, Minagawa J, Dann M (2022) An ancient function of PGR5 in iron delivery? Trends in Plant Sci 27: 971-980 doi: 10.1016/j.tplants.2022.04.006.
  • Wang L, Xu D, Scharf K, Frank W, Leister D, Kleine T (2022) The RNA-binding protein RBP45D of Arabidopsis promotes transgene silencing and flowering time. Plant J 109: 1397-1415 doi: 10.1111/tpj.15637.
  • Kleine T (2022) Arabidopsis thaliana FLOWERING LOCUS M: A direct target of RBP45d? Plant Cell 34: 4138-4140 doi: 10.1093/plcell/koac247.
  • Neusius D, Kleinknecht L, Teh JT, Ostermeier M, Kelterborn S, Eirich J, Hegemann P, Finkemeier I, Bohne A-V, Nickelsen J (2022) Lysine acetylation regulates moonlighting activity of the E2 subunit of the chloroplast pyruvate dehydrogenase complex in Chlamydomonas. Plant J 111: 1780–1800 doi: 10.1111/tpj.15924.
  • Füßl M, König A-C, Eirich J, Hartl A, Kleinknecht L, Bohne A-V, Harzen A, Kramer K, Leister D, Nickelsen J, Finkemeier I (2022) Dynamic light and acetate-dependent regulation of the proteome and lysine acetylome of Chlamydomonas. Plant J 109: 261-277 doi: 10.1111/tpj.15555.
  • Sinha N, Eirich J, Finkemeier I, Grimm B (2022) Glutamate 1-semialdehyde aminotransferase is connected to GluTR by GluTR-binding protein and contributes to the rate-limiting step of 5-aminolevulinic acid synthesis.  Plant Cell 34: 4623-4640 doi: 10.1093/plcell/koac237.
  • Yuan J, Ma T, Ji S, Hedtke B, Grimm B, Lin R (2022) Two chloroplast-localized MORF proteins act as chaperones to maintain tetrapyrrole biosynthesis. New Phytol 235: 1868-1883. doi: 10.1111/nph.18273.
  • Wang P, Ji S, Grimm B (2022) Post-translational regulation of metabolic checkpoints in plant tetrapyrrole biosynthesis. J Exp Bot 73: 4624-4636. doi: 10.1093/jxb/erac203.
  • Carius Y, Ries F, Gries K, Trentmann O, Lancaster CRD, Willmund F (2022) Structural features of chloroplast trigger factor determined at 2.6 Å resolution. Acta Crystallogr D Struct Biol 1: 1259-1272 doi: 10.1107/S2059798322009068.
  • Niemeyer J, Schroda M (2022) New destination vectors facilitate Modular Cloning for Chlamydomonas. Current Genetics 68: 531-536 doi: 10.1007/s00294-022-01239-x.
  • Özugur S, Chávez MN, Sanchez-Gonzalez R, Kunz L, Nickelsen J, Straka H (2022) Transcardial injection and vascular distribution of microalgae in Xenopus laevis as means to supply the brain with photosynthetic oxygen. STAR Protoc 3: 101250 doi: 10.1016/j.xpro.2022.101250.
  • Altensell J, Wartenberg R, Haferkamp I, Hassler S, Scherer V, Steensma P, Fitzpatrick T B, Sharma A, Sandoval-Ibañez O, Pribil M, Lehmann M, Leister D, Kleine T, Neuhaus HE (2022) Loss of a pyridoxal-phosphate phosphatase rescues Arabidopsis lacking an endoplasmic reticulum ATP carrier. Plant Physiol 189: 49–65 doi: 10.1093/plphys/kiac048.
  • Peter J, Huleux M, Spaniol B, Sommer F, Neunzig J, Schroda M, Li-Beisson Y, Philippar K (2022) Fatty acid export (FAX) proteins contribute to oil production in the green microalga Chlamydomonas reinhardtii. Front Mol Biosci 9: 939834 doi: 10.3389/fmolb.2022.939834.
  • Zhang N, Mattoon EM, McHargue W, Venn B, Zimmer D, Pecani K, Jeong J, Anderson CM, Chen C, Berry JC, Xia M, Tzeng SC, Becker E, Pazouki L, Evans B, Cross F, Cheng J, Czymmek KJ, Schroda M, Mühlhaus T, Zhang R (2022) Systems-wide analysis revealed shared and unique responses to moderate and acute high temperatures in the green alga Chlamydomonas reinhardtii. Commun Biol 5: 460 doi: 10.1038/s42003-022-03359-z.
  • Schroda M, Remacle C (2022) Molecular Advancements Establishing Chlamydomonas as a Host for Biotechnological Exploitation. Front Plant Sci 13: 911483 doi: 10.3389/fpls.2022.911483.
  • Kitashova A, Adler SO, Richter AS, Eberlein S, Dziubek D, Klipp E, Nägele T (2023). Limitation of sucrose biosynthesis shapes carbon partitioning during plant cold acclimation. Plant Cell and Environ 46: 464-478 doi: 10.1111/pce.14483.
  • Araguirang GE, Richter AS (2022). Activation of anthocyanin biosynthesis in high light – what is the initial signal? New Phytol 236: 2037-2043 doi: 10.1111/nph.18488.
  • Folsche V, Grossmann C, Richter AS (2022) Impact of Porphyrin Binding to GENOMES UNCOUPLED 4 on Tetrapyrrole Biosynthesis in planta. Front Plant Sci 13: 850504 doi: 10.3389/fpls.2022.850504.
  • Nägele T (2022) Metabolic regulation of subcellular sucrose cleavage inferred from quantitative analysis of metabolic functions. Quant Plant Biol 3: e10 doi: 10.1017/qpb.2022.5.
  • Ji D, Li Q, Guo Y, An W, Manavski N, Meurer J, Wei C (2022) NADP+ Supply adjusts the synthesis of photosystem I in Arabidopsis chloroplasts. Plant Physiol 189: 2128-2143 doi: 10.1093/plphys/kiac161.
  • DeTar RA, Höhner R, Manavski N, Blackholm M, Meurer J, Kunz HH (2022) Loss of salt overly sensitive 1 prevents virescence in chloroplast K+/H+ EFFLUX ANTIPORTER-deficient mutants. Plant Physiol 189: 1220-1225 doi: 10.1093/plphys/kiac142.
  • Seydel C, Biener J, Brodsky V, Eberlein S, Nägele T (2022) Predicting plant growth response under fluctuating temperature by carbon balance modelling. Commun Biol 5: 164 doi: 10.1038/s42003-022-03100-w.
  • Okooboh G, Haferkamp I, Valifard M, Pommerrenig B, Kelly A, Feussner I, Neuhaus E (2022) Overexpression of the vacuolar sugar importer BvTST1 from sugar beet in Camelina improves seed properties and leads to altered root characteristics. Physiol Plant 174: e13653 doi: 10.1111/ppl.13653.
  • Trösch R, Ries F, Westrich LA, Gao Y, Herkt C, Hoppstädter J, Heck-Roth J, Mustas M, Scheuring YC, Räschle M, Zoschke R, Willmund F (2022) Fast and global reorganization of the chloroplast protein biogenesis network during heat acclimation. Plant Cell 34: 1075-1099 doi: 10.1093/plcell/koab317.
  • Schwenkert S, Fernie AR, Geigenberger P, Leister D, Möhlmann T, Naranjo B, Neuhaus HE (2022) Chloroplasts are key players to cope with light and temperature stress. Trends Plant Sci 27: 577-587 doi: 10.1016/j.tplants.2021.12.004.
  • Seydel C, Kitashova A, Fürtauer L, Nägele T (2022) Temperature-induced dynamics of plant carbohydrate metabolism. Physiol Plant 174: e13602 doi: 10.1111/ppl.13602.
  • Spaniol B, Lang J, Venn B, Schake L, Sommer F, Mustas M, Geimer S, Wollman FA, Choquet Y, Mühlhaus T, Schroda M (2022) Complexome profiling on the Chlamydomonas lpa2 mutant reveals insights into PSII biogenesis and new PSII associated proteins. J Expt Bot 73: 245-262 doi: 10.1093/jxb/erab390.
  • Loiacono VF, Walther D, Seeger S, Thiele W, Gerlach I, Karcher D, Schöttler MA, Zoschke R, Bock R (2022) Emergence of novel RNA editing sites by changes in the binding affinity of a conserved PPR protein. Mol Biol Evol 39: 12 doi: 10.1093/molbev/msac222.
  • Sandoval-Ibáñez O, Rolo, D, Ghandour R, Hertle AP, Armarego-Marriott T, Sampathkumar A, Zoschke R, Bock R (2022) De-etiolation-induced protein 1 (DEIP1) mediates assembly of the cytochrome b6f complex in Arabidopsis. Nat Commun 13: 4045 doi: 10.1038/s41467-022-31758-7.
  • Gao Y, Thiele W, Saleh O, Scossa F, Arabi F, Zhang H, Sampathkumar A, Kühn K, Fernie A, Bock R, Schöttler MA, Zoschke R (2022) Chloroplast translational regulation uncovers nonessential photosynthesis genes as key players in plant cold acclimation. Plant Cell 34: 2056-2079 doi: 10.1093/plcell/koac056.
  • Penzler JF, Marino G, Reiter B, Kleine T, Naranjo B, Leister D (2022) Commonalities and specialties in photosynthetic functions of PROTON GRADIENT REGULATION5 variants in Arabidopsis. Plant Physiol 190: 1866-1882 doi: 10.1093/plphys/kiac362.
  • Schneider K, Venn B, Mühlhaus T (2022) Plotly.NET: A fully featured charting library for .NET programming languages. F100Res 11: 1094 doi: 10.12688/f1000research.123971.1.

2021

  • Zimmer D, Swart C, Graf A, Arrivault S, Tillich M, Proost S, Nikoloski Z, Stitt M, Bock R, Mühlhaus T, Boulouis A (2021) Topology of the redox network during induction of photosynthesis as revealed by time-resolved proteomics in tobacco. Sci Adv 7: eabi8307 doi: 10.1126/sciadv.abi8307.
  • Espinoza-Corral R, Schwenkert S, Lundquist PK (2021) Molecular changes of Arabidopsis thaliana plastoglobules facilitate thylakoid membrane remodeling under high light stress. Plant J 106: 1571-1587 doi:10.1111/tpj.15253
  • Ji S, Siegel A, Shan SO, Grimm B, Wang P (2021) Chloroplast SRP43 autonomously protects chlorophyll biosynthesis proteins against heat shock. Nat Plants 7: 1420-1432. doi: 10.1038/s41477-021-00994-y.
  • Gawroński P, Enroth C, Kindgren P, Marquardt S, Karpiński S, Leister D, Jensen P E, Vinther J, Scharff LB (2021) Light-Dependent Translation Change of Arabidopsis psbA Correlates with RNA Structure Alterations at the Translation Initiation Region. Cells 10: 322 doi: 10.3390/cells10020322.
  • Gawroński P, Burdiak P, Scharff LB, Mielecki J, Górecka M, Zaborowska M, Leister D, Waszczak C, Karpiński S (2021) CIA2 and CIA2-LIKE are required for optimal photosynthesis and stress responses in Arabidopsis thaliana. Plant J 105: 619-638 doi: 10.1111/tpj.15058.
  • Fu HY, Ghandour R, Ruf S, Zoschke R, Bock R, Schöttler MA (2021) The availability of neither D2 nor CP43 limits the biogenesis of photosystem II in tobacco. Plant Physiol 185: 1111-1130 doi: 10.1093/plphys/kiaa052.
  • Garcia-Molina A, Lehmann M, Schneider K, Klingl A, Leister D (2021) Inactivation of cytosolic FUMARASE2 enhances growth and photosynthesis under simultaneous copper and iron deprivation in Arabidopsis. Plant J 106: 766-784 doi: 10.1111/tpj.15199.
  • Dann M, Ortiz E M, Thomas M, Guljamow A, Lehmann M, Schaefer H, Leister D (2021) Enhancing photosynthesis at high light levels by adaptive laboratory evolution. Nat Plants 7: 681-695 doi: 10.1038/s41477-021-00904-2.
  • Wang L, Kleine T (2021) Singlet oxygen and protochlorophyllide detection in Arabidopsis thaliana. Methods Mol Biol 2202: 63-69 doi: 10.1007/978-1-0716-0896-8_5.
  • Hickl D, Drews F, Girke C, Zimmer D, Mühlhaus T, Hauth J, Nordström K, Trentmann O, Neuhaus E, Scheuring D, Fehlmann T, Keller K, Simon M, Möhlmann T (2021) Differential degradation of RNA species by autophagy-related pathways in Arabidopsis. J Exp Bot 72: 6867-6881. doi: 10.1093/jxb/erab321.
  • Özugur S, Chávez MN, Sanchez-Gonzalez R, Kunz L, Nickelsen J, Straka H (2021) Green oxygen power plants in the brain rescue neuronal activity. iScience 24: 103158 doi: 10.1016/j.isci.2021.103158
  • Westrich LD, Gotsmann VL, Herkt C, Ries F, Kazek T, Trösch R, Armbruster L, Mühlenbeck JS, Ramundo S, Nickelsen J, Finkemeier I, Wirtz M, Storchová Z, Räschle M, Willmund F (2021) The versatile interactome of chloroplast ribosomes revealed by affinity purification mass spectrometry. Nucleic Acids Res 11: 400-415 doi: 10.1093/nar/gkaa1192.
  • Manavski N, Vicente A, Chi W, Meurer J (2021) The Chloroplast Epitranscriptome: Factors, Sites, Regulation, and Detection Methods. Genes (Basel) 12: 1121 doi: 10.3390/genes12081121.
  • Bellin L, Scherer V, Dörfer E, Lau A, Vicente AM, Meurer J, Hickl D, Möhlmann T (2021) Cytosolic CTP Production Limits the Establishment of Photosynthesis in Arabidopsis. Front Plant Sci 12: 789189 doi: 10.3389/fpls.2021.789189.
  • DeTar RA, Barahimipour R, Manavski N, Schwenkert S, Höhner R, Bölter B, Inaba T, Meurer J, Zoschke R, Kunz HH (2021) Loss of inner-envelope K+/H+ exchangers impairs plastid rRNA maturation and gene expression. Plant Cell 33: 2479-2505 doi: 10.1093/plcell/koab123.
  • Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD (2021) Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity. Cell 184: 3643-3659 doi: 10.1016/j.cell.2021.05.011.
  • Niemeyer J. Scheuring D, Oestreicher J, Morgan B, Schroda M (2021) Real-time monitoring of subcellular H2O2 distribution in Chlamydomonas reinhardtii. Plant Cell 33: 2935-2949 doi: 10.1093/plcell/koab176.
  • Dittmer S, Kleine T, Schwenkert T (2021) The TPR- and J-domain-containing proteins DJC31 and DJC62 are involved in abiotic stress responses in Arabidopsis thaliana. J Cell Sci 134: jcs259032 doi: 10.1242/jcs.259032.
  • Wang N, Wang Y, Zhao Q, Zhang X, Peng C, Zhang W, Liu Y, Vallon O, Schroda M, Cong Y, Liu C (2021) The cryo-EM structure of the chloroplast ClpP complex. Nat Plants 7: 1505-1515 doi: 10.1038/s41477-021-01020-x.
  • Kleine T, Nägele T, Neuhaus HE, Schmitz-Linneweber C, Fernie AR, Geigenberger P, Grimm B, Kaufmann K, Klipp E, Meurer J, Möhlmann T, Mühlhaus T, Naranjo B, Nickelsen J, Richter A, Ruwe H, Schroda M, Schwenkert S, Trentmann O, Willmund F, Zoschke R, Leister D (2021). Acclimation in plants - the Green Hub consortium. Plant J 106: 23-40 doi: 10.1111/tpj.15144.
  • Wang P, Grimm B (2021) Connecting Chlorophyll Metabolism with Accumulation of the Photosynthetic Apparatus. Trends Plant Sci 26: 484-495 doi: 10.1016/j.tplants.2020.12.005.
  • Krantz M, Zimmer D, Adler SO, Kitashova A, Klipp E, Mühlhaus T, Nägele T (2021). Data Management and Modeling in Plant Biology. Front Plant Sci 12: 1786 doi: 10.3389/fpls.2021.717958.
  • Bellin L, Del Caño-Ochoa F, Velázquez-Campoy A, Möhlmann T, Ramón-Maiques S (2021) Mechanisms of feedback inhibition and sequential firing of active sites in plant aspartate transcarbamoylase. Nat Commun 12: 947 doi: 10.1038/s41467-021-21165-9.
  • Aarabi F, Rakpenthai A, Barahimipour R, Gorka M, Alseekh S, Zhang Y, Salem MA, Bruckner F, Omranian N, Watanabe M, Nikoloski Z, Giavalisco P, Tohge T, Graf A, Fernie AR, Hoefgen R (2021) Sulfur deficiency-induced genes affect seed protein accumulation and composition under sulfate deprivation. Plant Physiol 187: 2419-2434 doi: 10.1093/plphys/kiab386.
  • Medeiros DB, Aarabi F, Martinez Rivas FJ, Fernie AR (2021) The knowns and unknowns of intracellular partitioning of carbon and nitrogen, with focus on the organic acid-mediated interplay between mitochondrion and chloroplast. J Plant Physiol 266: 153521 doi: 10.1016/j.jplph.2021.153521.
  • Cvetkovic J, Haferkamp I, Rode R, Keller I, Pommer­renig B, Trentmann O, Altensell J, Fischer-Stettler M, Eicke S, Zeeman SC, Neuhaus HE (2021) Ectopic yeast maltase in mex1-1 chloroplasts alleviates the dwarf phenotype and improves plant frost tolerance. Plant Physiol 186: 315-329 doi: 10.1093/plphys/kiab082.
  • Méteignier LV, Ghandour R, Zimmerman A, Kuhn L, Meurer J, Zoschke R, Hammani K (2021) Arabidopsis mTERF9 protein promotes chloroplast ribosomal assembly and translation by establishing ribonucleoprotein interactions in vivo. Nucleic Acids Res 49: 1114-1132 doi: 10.1093/nar/gkaa1244.
  • Krantz M, Legen J, Gao Y, Zoschke R, Schmitz-Linneweber C, Klipp E (2021) Modeling indicates degradation of mRNA and protein as a potential regulation mechanisms during cold acclimation. J Plant Res 134: 873-883 doi: 10.1007/s10265-021-01294-4.
  • Naranjo B, Penzler JF, Rühle T, Leister D (2021) NTRC Effects on Non-Photochemical Quenching Depends on PGR5. Antioxidants 10: 900 doi: 10.3390/antiox10060900.
  • Rühle T, Dann M, Reiter B, Schünemann D, Naranjo B, Penzler JF, Kleine T, Leister D (2021) PGRL2 triggers degradation of PGR5 in the absence of PGRL1. Nat Commun, 12: 3941 doi: 10.1038/s41467-021-24107-7.
  • Okuzaki A, Rühle T, Leister D, Schmitz-Linneweber C (2021) The acidic domain of the chloroplast RNA-binding protein CP31A supports cold tolerance in Arabidopsis thaliana. J Exp Bot 72: 4904-4914 doi: 10.1093/jxb/erab165.
  • Li M, Ruwe H, Melzer M, Junker A, Hensel G, Tschiersch H, Schwenkert S, Chamas S, Schmitz-Linneweber C, Börner T, Stein N (2021) The Arabidopsis AAC Proteins CIL and CIA2 Are Sub-functionalized Paralogs Involved in Chloroplast Development. Front Plant Sci 12: 681375 doi: 10.3389/fpls.2021.681375.
  • Hickl D, Drews F, Girke C, Zimmer D, Mühlhaus T, Hauth J, Nordström K, Trentmann O, Neuhaus HE, Scheuring D, Fehlmann T, Keller K, Simon M, Möhlmann T (2021) Differential degradation of RNA species by autophagy-related pathways in Arabidopsis. J Exp Bot 72: 6867-6881 doi: 10.1093/jxb/erab321.

2020

  • Chávez MN, Moellhoff N, Schenck TL, Egaña JT, Nickelsen J (2020) Photosymbiosis for Biomedical Applications. Front Bioeng Biotechnol 8: 577204 doi: 10.1111/lam.13740.
  • Aarabi F, Naake T, Fernie AR, Hoefgen R (2020) Coordinating sulfur pools under sulfate deprivation. Trends Plant Sci 25: 1227-1239 doi: 10.1016/j.tplants.2020.07.007.
  • Richter AS, Tohge T, Fernie AR, Grimm B (2020) The genomes uncoupled-dependent signalling pathway coordinates plastid biogenesis with the synthesis of anthocyanins. Philos Trans R Soc Lond B Biol Sci 375: 20190403 doi: 10.1098/rstb.2019.0403.
  • Garcia-Molina A, Marino G, Lehmann M, Leister D (2020) Systems biology of responses to simultaneous copper and iron deficiency in Arabidopsis. Plant J  103: 2119-2138 doi: 10.1111/tpj.14887.
  • Schneider K, Venn B, Mühlhaus T (2020) TMEA: A Thermodynamically Motivated Framework for Functional Characterization of Biological Responses to System Acclimation. Entropy 22: 1030 doi: 10.3390/e22091030.
  • Teubner M, Lenzen B, Espenberger LB, Fuss J, Nickelsen J, Krause K, Ruwe H, Schmitz-Linneweber C (2020) The chloroplast ribonucleoprotein CP33B quantitatively binds the psbA mRNA. Plants 9: 367 doi: 10.3390/plants9030367.
  • Watkins KP, Williams-Carrier R, Chotewutmontri P, Friso G, Teubner M, Belcher S, Ruwe H, Schmitz-Linneweber C, van Wijk KJ, Barkan A (2020) Exploring the proteome associated with the mRNA encoding the D1 reaction center protein of Photosystem II in plant chloroplasts. Plant J 102: 369-382 doi: 10.1111/tpj.14629.
  • Szabo EX, Reichert P, Lehniger MK, Ohmer M, de Francisco Amorim M, Gowik U, Schmitz-Linneweber C, Laubinger S (2020) Metabolic Labeling of RNAs Uncovers Hidden Features and Dynamics of the Arabidopsis Transcriptome. Plant Cell 32: 871-887 doi: 10.1105/tpc.19.00214.
  • Lenzen B, Rühle T, Lehniger MK, Okuzaki A, Labs M, Muino JM, Ohler U, Leister D, Schmitz-Linneweber C (2020) The chloroplast RNA binding protein CP31A has a preference for mRNAs encoding the subunits of the chloroplast NAD(P)H dehydrogenase complex and is required for their accumulation. Int J Mol Sci 21: 5633 doi: 10.3390/ijms21165633.
  • Méteignier LV, Ghandour R, Meierhoff K, Zimmerman A, Chicher J, Baumberger N, Alioua A, Meurer J, Zoschke R, Hammani K (2020) The Arabidopsis mTERF-repeat MDA1 protein plays a dual function in transcription and stabilization of specific chloroplast transcripts within the psbE and ndhH operons. New Phytol 227: 1376-1391 doi: 10.1111/nph.16625.
  • Wang P, Grimm B (2020) Expression and Purification of Arabidopsis Transmembrane Protein BCM1 in Saccharomyces cerevisiae. Bio Protoc 10: e3758 doi: 10.21769/BioProtoc.3758.
  • Wang P, Richter AS, Kleeberg JRW, Geimer S, Grimm B (2020) Post-translational coordination of chlorophyll biosynthesis and breakdown by BCMs maintains chlorophyll homeostasis during leaf development.  Nat Commun 11: 1254 doi: 10.1038/s41467-020-14992-9.
  • Shanmugabalaji V, Grimm B, Kessler F (2020) Characterization of a Plastoglobule-Localized SOUL4 Heme-Binding Protein in Arabidopsis thaliana. Front Plant Sci 11: 2 doi: 10.3389/fpls.2020.00002.
  • Zou M, Mu Y, Chai X, Ouyang M, Yu LJ, Zhang L, Meurer J, Chi W (2020) The critical function of the plastid rRNA methyltransferase, CMAL, in ribosome biogenesis and plant development. Nucleic Acids Res 48: 3195-3210 doi: 10.1093/nar/gkaa129.
  • Kitashova A, Schneider K, Fürtauer L, Schröder L, Scheibenbogen T, Fürtauer S, Nägele T (2020) Impaired chloroplast positioning affects photosynthetic capacity and regulation of the central carbohydrate metabolism during cold acclimation. Photosyn Res 147: 49-50 doi: 10.1007/s11120-020-00795-y.
  • Schneider K, Abazaj L, Niemann C, Schröder L, Nägele T (2020) Cold acclimation has a differential effect on leaf vascular bundle structure and carbon export rates in natural Arabidopsis accessions originating from southern and northern Europe. Plant Direct 4: e00251 doi: 10.1002/pld3.251.
  • Atanasov V, Fürtauer L, Nägele T (2020) Indications for a central role of hexokinase activity in natural variation of heat acclimation in Arabidopsis thaliana. Plants 9: 819 doi: 10.3390/plants9070819.
  • Habermann K, Tiwari B, Krantz M, Adler SO, Klipp E, Arif MA, Frank W (2020) Identification of small non-coding RNAs responsive to GUN1 and GUN5 related retrograde signals in Arabidopsis thaliana. Plant J 104: 135-155 doi: 10.1111/tpj.14912.
  • Wang L, Leister D, Guan L, Zheng Y, Schneider K, Lehmann M, Apel K, Kleine T (2020) The Arabidopsis SAFEGUARD1 suppresses singlet oxygen-induced stress responses by protecting grana margins.
    Proc Natl Acad Sci USA 117: 6918-6927 doi: 10.1073/pnas.1918640117.
  • Garcia-Molina A, Kleine T, Schneider K, Mühlhaus T, Lehmann M, Leister D (2020) Translational components contribute to acclimation responses to high light, heat, and cold in Arabidopsis. iScience 23: 101331 doi: 10.1016/j.isci.2020.101331.
  • Schroda M (2020) Phosphoinositides regulate chloroplast processes. Proc Natl Acad Sci USA 117: 9154-9156 doi: 10.1073/pnas.2004189117.
  • Hammel A, Sommer F, Zimmer D, Stitt M, Mühlhaus T, Schroda M (2020) Overexpression of Sedoheptulose-1,7-Bisphosphatase Enhances Photosynthesis in Chlamydomonas reinhardtii and Has No Effect on the Abundance of Other Calvin-Benson Cycle Enzymes. Front Plant Sci 11: 868 doi: 10.3389/fpls.2020.00868.
  • Rosado-Souza, Fernie RA, Aarabi F (2020) Ascorbate and thiamin: metabolic modulators in plant acclimation responses. Plants 9: E101 doi: 10.3390/plants9010101.
  • Ries F, Herkt C, Willmund F (2020) Co-translational protein folding and sorting in chloroplasts. Plants 9: 214 doi: 10.3390/plants9020214.
  • Vu DP , Rodrigues CM, Jung B , Meissner G, Klemens PAW, Holtgräwe D Fürtauer L, Nägele T, Nieberl P, Pommerrenig B, Neuhaus HE (2020) Vacuolar sucrose homeostasis is critical for development, seed properties, and night-time survival in Arabidopsis. J Exp Bot 71: 4930-4943 doi: 10.1093/jxb/eraa205.
  • Szabo EX, Reichert P, Lehniger MK, Ohmer M, de Francisco Amorim M, Gowik U, Schmitz-Linneweber C, Laubinger S (2020) Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome. Plant Cell 32: 871-887 doi: 10.1105/tpc.19.00214.
  • Wang L, Leister D, Kleine T (2020) Chloroplast development and genomes uncoupled signaling are independent of the RNA-directed DNA methylation pathway. Sci Rep 10: 15412 doi: 10.1038/s41598-020-71907-w.
  • Adler SO, Klipp E (2020) Chemical Reaction Networks Possess Intrinsic, Temperature-Dependent Functionality. Entropy 22: 117 doi: 10.3390/e22010117.
  • Reiter B, Vamvaka E, Marino G, Kleine T, Jahns P, Bolle C, Leister D, Rühle T (2020) The Arabidopsis Protein CGL20 is Required for Plastid 50S Ribosome Biogenesis. Plant Physiol 182: 1222-1238 doi: 10.1104/pp.19.01502.
  • Eisa A, Malenica K, Schwenkert S, Bölter B (2020) High light acclimation induces chloroplast precursor phosphorylation and reduces import efficiency. Plants 9: E24 doi: 10.3390/plants9010024.
  • Theis J, Niemeyer J, Schmollinger S, Ries F, Rütgers M, Gupta TK, Sommer F, Muranaka LS, Venn B, Schulz-Raffelt M, Willmund F, Engel BD, Schroda M (2020) VIPP2 interacts with VIPP1 at chloroplast membranes and modulates a retrograde signal for HSP22E/F and LHCSR3 gene expression in Chlamydomonas reinhardtii. Plant Cell Environ 43: 1212-1229 doi: 10.1111/pce.13732.
  • Garcia-Molina A, Leister D (2020) Accelerated relaxation of photoprotection impairs biomass accumulation in Arabidopsis. Nat Plants 6: 9-12 doi: 10.1038/s41477-019-0572-z.
  • Xu D, Leister D, Kleine T (2020) VENOSA4, a Human dNTPase SAMHD1 Homolog, Contributes to Chloroplast Development and Abiotic Stress Tolerance. Plant Physiol 182: 721-729 doi: 10.1104/pp.19.01108.
  • Fernández-Marín B, Gulías J, Figueroa C.M, Íñiguez C, Clemente-Moreno MJ, Nunes-Nesi A, Fernie AR, Cavieres LA, Bravo L, García-Plazaola JI, Gago J (2020) How do vascular plants face photosynthesis in extreme environments? An integrative ecophysiological and biochemical story. Plant J 101: 979-1000 doi: 10.1111/tpj.14694.
  • da Fonseca-Pereira P, Souza PVL, Hou L-Y, Schwab S, Geigenberger P, Nunes-Nesi A, Timm S, Fernie AR, Thormählen I, Araújo WL, Daloso DM (2020) Thioredoxin h2 contributes to the redox regulation of mitochondrial photorespiratory metabolism. Plant Cell Environ 43: 188-208 doi: 10.1111/pce.13640.
  • Xu D, Dhiman R, Garibay A, Mock HP, Leister D, Kleine T (2020) Cellulose defects in the Arabidopsis secondary cell wall promote early chloroplast development. Plant J 101: 156-170 doi: 10.1111/tpj.14527.
  • Tiwari B, Habermann K, Arif MA, Weil HL, Garcia-Molina A, Kleine T, Mühlhaus T, Frank W (2020) Identification of small RNAs during cold acclimation in Arabidopsis thaliana. BMC Plant Biol 20: 298 doi: 10.1186/s12870-020-02511-3.
  • Höhner R, Pribil M, Herbstová M, Lopez L S, Kunz H H, Li M, Wood M, Svoboda V, Puthiyaveetil S, Leister D, Kirchhoff H (2020) Plastocyanin is the long-range electron carrier between photosystem II and photosystem I in plants. Proc Natl Acad Sci USA 117: 15354-15362 doi: 10.1073/pnas.2005832117.
  • Watkins KP, Williams-Carrier R, Chotewutmontri P, Friso G, Teubner M, Belcher S, Ruwe H, Schmitz-Linneweber C, van Wijk KJ, Barkan A (2020) Exploring the proteome associated with the mRNA encoding the D1 reaction center protein of Photosystem II in plant chloroplasts. Plant J 102: 369-382 doi: 10.1111/tpj.14629.
  • Trentmann O, Mühlhaus T, Zimmer D, Sommer F, Schroda M, Haferkamp I, Keller I, Pommerrenig B, Neuhaus HE (2019) Identification of chloroplast envelope proteins with critical importance for cold acclimation of Arabidopsis. Plant Physiol 182: 1239-1255 doi: 10.1104/pp.19.00947.
  • Jarquín-Cordero M, Noemi Chávez M, Centeno-Cerdas C, Bohne AV, Hopfner U, Machens HG, Egaña JT, Nickelsen J (2020) Towards a biotechnological platform for the production of human growth factors in the green alga Chlamydomonas reinhardtii. Appl Microbiol Biotechnol 104: 725-739. doi: 10.1007/s00253-019-10267-6.

2019

  • Tabatabaei I, Dal Bosco C, Bednarska M, Ruf S, Meurer J, Bock R (2019) A highly efficient sulfadiazine selection system for the generation of transgenic plants and algae. Plant Biotechnol 17: 638-649 doi: 10.1111/pbi.13004.
  • Schroda M (2020) Good News for Nuclear Transgene Expression in Chlamydomonas. Cells 8: E1534 doi: 10.3390/cells8121534.
  • Bölter B, Mitterreiter MJ, Schwenkert S, Finkemeier I, and Kunz H H (2019) The topology of plastid inner envelope 1 potassium cation efflux antiporter KEA1 provides new insights into its regulatory features. Photosyn Res 145: 43-54 doi: 10.1007/s11120-019-00700-2.
  • Krantz M, Klipp E (2019) Moonlighting proteins – an approach to systematize the concept. In Silico Biol 14: 1-13 doi: 10.3233/ISB-190473.
  • Watkins KP, Williams-Carrier R. Chotewutmontri P,Teubner M, Friso G, Belcher S, Ruwe R, Schmitz-Linneweber C, van Wijk K, Barkan A (2019) Exploring the proteome associated with the mRNA encoding the D1 reaction center protein of Photosystem II in plant chloroplasts. Plant J 102: 369-382 doi: 10.1111/tpj.14629.
  • Dann M, Leister D (2019) Evidence that cyanobacterial Sll1217 functions analogously to PGRL1 in enhancing PGR5-dependent cyclic electron flow. Nat Commun 10: 5299 doi: 10.1038/s41467-019-13223-0.
  • Hristou A, Gerlach I, Stolle DS, Neumann J, Bischoff A, Dünschede B, Nowaczyk MM, Zoschke R, Schünemann D (2019) Ribosome-associated chloroplast SRP54 enables efficient co-translational membrane insertion of key photosynthetic proteins. Plant Cell 31: 2734-2750 doi: 10.1105/tpc.19.00169.
  • Buchberger F, Stibor H, Neusius D, Nickelsen J, Stockenreiter M (2019) Transgenic and cell wall deficient Chlamydomonas reinhardtii food affects life history of Daphnia magna. J Appl Phycol 104: 725-739 doi: 10.1007/s10811-019-01983-7.
  • Schuster M, Gao Y, Schöttler MA, Bock R, Zoschke R (2019) Limited Responsiveness of Chloroplast Gene Expression during Acclimation to High Light in Tobacco. Plant Physiol 182: 424-435 doi: 10.1104/pp.19.00953.
  • Theis J, Lang J, Spaniol B, Ferte S, Niemeyer J, Sommer F, Zimmer D, Venn B, Mehr SF, Mühlhaus T, Wollman FA, Schroda M (2019) The Chlamydomonas deg1c mutantaccumulates proteins involved in high light acclimation. Plant Phys 181: 1480-1497 doi: 10.1104/pp.19.01052.
  • Medeiros DB, Arrivault S, Alpers J, Fernie AR, Aarabi F (2019) Non-aqueous fractionation (NAF) for metabolite analysis in subcellular compartments of Arabidopsis leaf tissues. BioProtoc 9: 20 doi: 10.21769/BioProtoc.3399.
  • Shapiguzov A, Nikkanen L, Fitzpatrick D, Vainonen JP, Tiwari A, Gossens R, Alseekh S, Aarabi F, Blokhina O, Panzarová K, Benedikty Z, Tyystjärvi E, Fernie AR, Trtílek M, Aro E.M, Rintamäk E, Kangasjärvi J (2019) Increased expression of mitochondrial dysfunction stimulon genes affects chloroplast redox status and photosynthetic electron transfer in Arabidopsis. Phil Trans Royal Soc B 8: e43284 doi: 10.7554/eLife.43284.
  • Eisa A, Bölter B, Schwenkert S (2019) The ACT domain in chloroplast precursor–phosphorylating STY kinases binds metabolites and allosterically regulates kinase activity. J Biol Chem 294: 17278i-17288i doi: 10.1074/jbc.RA119.010298.
  • Lee K, Lehmann M, Paul MV, Wang L, Luckner M, Wanner G, Geigenberg P, Leister D, Kleine T (2019) Lack of FIBRILLIN6 in Arabidopsis thaliana affects light acclimation and sulfate metabolism. New Phytol 225: 1715-1731 doi: 10.1111/nph.16246.
  • Höhner R, Galvis VC, Strand DD, Völkner C, Krämer M, Messer M, Dinc F, Sjuts I, Bölter B, Kramer DM, Armbruster U, Kunz HH (2019) Photosynthesis in Arabidopsis is unaffected by the function of the vacuolar K+ channel TPK3. Plant Physiol 189: 1322-1335 doi: 10.1104/pp.19.00255.
  • Thormählen I, Naranjo B, Trujillo-Hernandez JA, Reichheld P, Cejudo FJ, Geigenberger P (2019) On the elaborate network of thioredoxins in higher plants. Progress Bot 80: 233-252 doi: 10.1007/s00425-011-1349-4.
  • Rosado-Souza L, Proost S, Moulin M, Bergmann S, Bocobza SE, Aharoni A, Fitzpatrick TB, Muwil M, Fernie AR, Obata (2019) Appropriate thiamin pyrophosphate levels are required for acclimation to changes in photoperiod. Plant Physiol 180: 185-197 doi: 10.1104/pp.18.01346.
  • de Souza Chaves I, Feitosa-Araújo E, Florian A, Medeiros D.B, da Fonseca-Pereira P, Charton L, Heyneke E, Apfata JAC, Pires MV, Mettler-Altmann T, Araújo WL, Neuhaus HE , Palmieri F, Obata T, Weber APM, Linka N, Fernie AR, Nunes-Nesi A (2019) The mitochondrial NAD+ transporter (NDT1) plays important roles in cellular NAD+ homeostasis in Arabidopsis thaliana. Plant J 100: 487-504 doi: 10.1111/tpj.14452.
  • Shapiguzov A, Vainonen JP, Hunter K, Tossavainen H, Tiwari A, Järvi S, Hellman M, Aarabi F, Alseekh S, Wybouw B, Van Der Kelen K, Nikkanen L, Krasensky-Wrzaczek J, Sipari N, Keinänen M, Tyystjärvi E, Rintamäki E, De Ryb-el B, Salojärvi J, Van Breusegem F, Fernie AR, Brosché M, Permi P, Aro EM, Wrzaczek M, Kangasjärvi J (2019) Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors. eLIFE 8: 43284 doi: 10.7554/eLife.43284.
  • Hou LY, Ehrlich M, Thormählen I, Lehmann M, Krahnert I, Obata T, Cejudo FJ, Fernie AR, Geigenberger P (2019) NTRC plays a crucial role in starch metabolism, redox balance and tomato fruit growth. Plant Physiol 181: 976-992 doi: 10.1104/pp.19.00911.
  • da Fonseca-Pereira P, Souza PVL, Hou LY, Schwab S, Geigenberger P, Nunes-Nesi A, Timm S, Fernie AR, Thormählen I, Araújo WL, Daloso DM (2019) Thioredoxin h2 contributes to the redox regulation of mitochondrial photorespiratory metabolism. Plant Cell Environ 43: 188-208 doi: 10.1111/pce.13640.
  • Zaffagnini M, Fermani S, Marchand CH, Costa A, Sparla F, Rouhier N, Geigenberger P, Lemaire SD, Trost P (2019) Redox homeostasis in photosynthetic organisms: novel and established thiol-based molecular mechanisms. Antioxid Redox Signal 31: 155-210 doi: 10.1089/ars.2018.7617.
  • Theis J, Gupta TK, Klingler J, Wan W, Albert S, Keller S, Engel BD, Schroda M (2019) VIPP1 rods engulf membranes containing phosphatidylinositol phosphates. Sci Rep 9: 8725 doi: 10.1038/s41598-019-44259-3.
  • Jiang J, Chai X, Manavski N, Williams-Carrier R, He B, Brachmann A, Ji D, Ouyang M, Liu Y, Barkan A, Meurer J, Zhang L, Chi W (2019) An RNA chaperone-like protein plays critical roles in chloroplast mRNA stability and translation in Arabidopsis and maize. Plant Cell 31: 1308-1327 doi: 10.1105/tpc.18.00946.
  • Richter AS, Banse C, Grimm B (2019) The GluTR-binding protein is the heme-binding factor for feedback control of glutamyl-tRNA reductase. eLIFE 8: e46300 doi: 10.7554/eLife.46300.
  • Richter AS, Tohge T, Fernie AR, Grimm B (2019) The genomes uncoupled dependent signaling pathway coordinates plastid biogenesis with the synthesis of photoprotective anthocyanins. Phil Trans Royal Soc B 375: 20190403 doi: 10.1098/rstb.2019.0403.
  • Wu GZ, Meyer EH, Richter AS, Schuster m, Ling Q, Schöttler MA, Walther D, Zoschke R, Grimm B, Jarvis RP, Bock R (2019) Control of retrograde signalling by protein import and cytosolic folding stress. Nat Plants 5: 525-538 doi: 10.1038/s41477-019-0415-y.
  • Richter AS, Grimm B (2019) The multifaceted regulation of 5-aminolevulinic acid synthesis. Numerous ways to control glutamyl-tRNA reductase. Academic Press 91: 69-88 doi: 10.1016/bs.abr.2018.12.001.
  • Grimm B (2019) Metabolism, structure and function of plant tetrapyrroles: control mechanisms of chlorophyll biosynthesis and analysis of chlorophyll-binding proteins. Serial Volume Editors: Bernhard Grimm, Academic Press Volume 91 ISBN: 9780128199824, 30th July 2019, 308 pages.
  • Grimm B (2019) Metabolism, structure and function of plant tetrapyrroles: introduction, microbial and eukaryotic chlorophyll synthesis. Academic Press Volume 90, ISBN: 9780081027523, 30th May.
  • Marino G, Naranjo B, Wang J, Penzler JF, Kleine T, Leister D (2019) Relationship of GUN1 to FUG1 in chloroplast protein homeostasis. Plant J 99: 521-535 doi: 10.1111/tpj.14342.
  • Guan L, Denkert N, Eisa A, Lehmann M, Sjuts I, Weiberg A, Soll J, Meinecke M, Schwenkert S (2019) JASSY, a chloroplast outer membrane protein required for jasmonate biosynthesis. Proc Nat Acad Sci USA 11: 10566-10575 doi: 10.1073/pnas.1900482116.
  • Espinoza-Corral R, Heinz S, Klingl A, Jahns P, Lehmann M, Meurer J, Nickelsen J, Soll J, Schwenkert S (2019) Plastoglobular protein 18 is involved in chloroplast function and thylakoid formation. J Exp Bot 70: 3981-3993 doi: 10.1093/jxb/erz177.
  • Arif MA, Hiß M, Tomek M, Busch HS, Meyberg R, Tintelnot S, Reski R, Rensing SA, Frank W (2019) ABA-induced vegetative diaspore formation in Physcomitrella patens. Front Plant Sci 10: 315 doi: 10.3389/fpls.2019.00315.
  • Zhao Q, Zhang X, Sommer F, Ta N, Wang N, Schroda M, Cong Y, Liu C (2019) Hetero-oligomeric CPN60 resembles highly symmetric group I chaperonin structure revealed by Cryo-EM. Plant J 98: 798-812 doi: 10.1111/tpj.14273.
  • Mechela A, Schwenkert S, Soll J (2019) A brief history of thylakoid biogenesis. Open Biol 9: 1 doi: 10.1098/rsob.180237.
  • Schmid LM, Ohler L, Möhlmann T, Brachmann A, Muiño JM, Leister D, Meurer J, Manavski N (2019) PUMPKIN, the sole plastid UMP kinase, associates with group II introns and alters their metabolism. Plant Physiol 179: 248-264 doi: 10.1104/pp.18.00687.
  • Ji D, Manavski N, Meurer J, Zhang L, Chi W (2019) Regulated chloroplast transcription termination. Biochim Biophys Acta 1860: 69-77 doi: 10.1016/j.bbabio.2018.11.011.
  • Trösch R, Willmund F (2019) The conserved theme of ribosome hibernation: from bacteria to chloroplast of plants. Biol Chem 400: 879-893 doi: 10.1515/hsz-2018-0436.
  • Rohr M, Ries F, Herkt C, Gotsmann VL, Westrich LD, Gries K, Trösch R, Christmann J, Chaux F, Jung M, Zimmer D, Mühlhaus T, Sommer FK, Schroda M, Keller S, Möhlmann T, Willmund F (2019) The role of plastidic trigger factor serving protein biogenesis in green algae and land plants. Plant Physiol  179: 1093-1110 doi: 10.1104/pp.18.01252.
  • Xu D, Marino G, Klingl A, Enderle B, Monte E, Kurth J, Hiltbrunner A, Leister D, Kleine T (2019) Extrachloroplastic PP7L functions in chloroplast development and abiotic stress tolerance. Plant Physiol 180: 323-341 doi: 10.1104/pp.19.00070.
  • Leister D (2019) Thawing out frozen metabolic accidents. BMC Biol 17: 8 doi: 10.1186/s12915-018-0621-5.
  • Leister D (2019) Piecing the puzzle together: the central role of reactive oxygen species and redox hubs in chloroplast retrograde signaling. Antioxid Redox Signal 30: 1206-1219 doi: 10.1089/ars.2017.7392.
  • Kacprzak SM, Mochizuki N, Naranjo B, Xu D, Leister D, Kleine T, Okamoto H, Terry MJ (2019) Plastid-to-nucleus retrograde signalling during chloroplast biogenesis does not require ABI4. Plant Physiol 179: 18-23 doi: 10.1104/pp.18.01047.

2018

  • Qu Y, Legen J, Arndt J, Henkel S, Hoppe G, Thieme C, Ranzini G, Muino JM, Weihe A, Ohler U, Weber G, Ostersetzer O, Schmitz-Linneweber C (2018) Ectopic transplastomic expression of a synthetic MatK gene leads to cotyledon-specific leaf variegation. Front Plant Sci 9: 1453 doi: 10.3389/fpls.2018.01453.
  • Crozet P, Navarro FJ, Willmund F, Mehrshahi P, Bakowski K, Lauersen KJ, Pérez-Pérez ME, Auroy P, Gorchs Rovira A, Sauret-Gueto S, Niemeyer J, Spaniol B, Theis J, Trösch R, Westrich LD, Vavitsas K, Baier T, Hübner W, de Carpentier F, Cassarini M, Danon A, Henri J, Marchand CH, de Mia M, Sarkissian K, Baulcombe DC, Peltier G, Crespo JL, Kruse O, Jensen PE, Schroda M, Smith AG, Lemaire SD (2018) Birth of a photosynthetic chassis: A MoClo toolkit enabling synthetic biology in the microalga chlamydomonas reinhardtii. ACS Synth Biol 7: 2074-2086 doi: 10.1021/acssynbio.8b00251.
  • Leister D (2018) Genetic engineering, synthetic biology and the light reactions of photosynthesis. Plant Physiol  179: 778-793 doi: 10.1104/pp.18.00360.
  • Leister D (2018) Experimental evolution in photoautotrophic microorganisms as a means of enhancing chloroplast functions. Essays Biochem 62: 77-84 doi: 10.1042/EBC20170010.
  • Pribil M, Sandoval-Ibáñez O, Xu W, Sharma A, Labs M, Liu Q, Galgenmüller C, Schneider T, Wessels M, Matsubara S, Jansson S, Wanner G, Leister D (2018) Fine-tuning of photosynthesis requires CURVATURE THYLAKOID1-mediated thylakoid plasticity. Plant Physiol 176: 2351-2364 doi: 10.1104/pp.17.00863.
  • Gawroński P, Jensen PE, Karpiński S, Leister D, Scharff LB (2018) Pausing of chloroplast ribosomes is induced by multiple features and is linked to the assembly of photosynthetic complexes. Plant Physiol 176: 2557-2569 doi: 10.1104/pp.17.01564.
  • Pulido P, Leister D (2018) Novel DNAJ-related proteins in Arabidopsis thaliana. New Phytol 217: 480-490 doi: 10.1111/nph.14827.
  • Manavski N, Schmid LM, Meurer J (2018) RNA-stabilization factors in chloroplasts of vascular plants. Essays Biochem 62: 51-64 doi: 10.1042/EBC20170061.
  • Rojas M, Ruwe H, Miranda RG, Zoschke R, Hase N, Schmitz-Linneweber C, Barkan A (2018) Unexpected functional versatility of the pentatricopeptide repeat proteins PGR3, PPR5 and PPR10. Nucl Acids Res 46: 10448-10459 doi: 10.1093/nar/gky737.
  • Ruwe H, Gutmann B, Schmitz-Linneweber C, Small I, Kindgren P (2018) The E domain of CRR2 participates in sequence-specific recognition of RNA in plastids. New Phytol 222: 218-229 doi: 10.1111/nph.15578.
  • Zoschke R, Bock R (2018) Chloroplast translation: structural and functional organization, operational control and regulation. Plant Cell 30: 745-770 doi: 10.1105/tpc.18.00016.
  • Richter AS, Pérez-Ruiz JM, Cejudo FJ, Grimm B (2018) Redox-control of chlorophyll biosynthesis mainly depends on thioredoxins  FEBS Lett 592: 3111-3115 doi: 10.1002/1873-3468.13216.
  • Zimmer D, Schneider K, Sommer F, Schroda M, Mühlhaus T (2018) Artificial intelligence understands peptide observability and assists with absolute protein quantification. Front Plant Sci 13: 1559 doi: 10.3389/fpls.2018.01559.
  • Paieri F, Tadini L, Manavski N, Kleine T, Ferrari R, Morandini P, Pesaresi P, Meurer J, Leister D (2018) The DEAD-box RNA helicase RH50 is a 23S-4.5S rRNA maturation factor that functionally overlaps with the plastid signaling factor GUN1. Plant Physiol 176: 634-648 doi: 10.1104/pp.17.01545.
  • Trösch R, Barahimipour R, Gao Y, Badillo-Corona JA, Gotsmann VL, Zimmer D, Mühlhaus T, Zoschke R, Willmund F (2018) Commonalities and differences of chloroplast translation in a green alga and land plants. Nat Plants 4: 564-575 doi: 10.1038/s41477-018-0211-0.
  • Arif MA, Alseekh S, Harb J, Fernie A, and Frank W (2018) Abscisic acid, cold and salt stimulate conserved metabolic regulation in the moss Physcomitrella patens. Plant Biol 20: 1014-1022 doi: 10.1111/plb.12871.
  • Patzke K, Prananingrum P, Klemens PAW, Trentman O, Rodriques CM, Keller I, Fernie AR, Geigenberger P, Bölter B, Lehmann M, Schmitz-Esser S, Pommerrenig B, Haferkamp I, Neuhaus HE (2018) The plastidic sugar transporter pSuT influences flowering and affects cold responses. Plant Physiol 179: 569-587 doi: 10.1104/pp.18.01036.
  • Pommerrening B, Ludewig F, Cvetkovic J, Trentmann O, Klemens PAW, Neuhaus HE (2018) In concert: orchestrated changes in carbohydrate homeostasis are critical for plant abiotic stress tolerance. Plant Cell Physiol 59: 1290-1299 doi: 10.1093/pcp/pcy037.
  • Hammel A, Zimmer D, Sommer F, Mühlhaus T, Schroda, M (2018) Absolute quantification of major photosynthetic protein complexes in Chlamydomonas reinhardtii using quantification concatamers (QconCATs). Front Plant Sci 9: 1265 doi: 10.3389/fpls.2018.01265.
  • Janowski M, Zoschke R, Scharff L, Martinez Jaime S, Ferrari C, Proost S, Ng Wei Xiong J, Omranian N, Musialak-Lange M, Nikoloski Z, Graf A, Schöttler MA, Sampathkumar A, Vaid N, Mutwil M (2018) AtRsgA from Arabidopsis thaliana is important for maturation of the small subunit of the chloroplast ribosome. Plant J 2: 404-420 doi: 10.1111/tpj.1404.
  • Bölter B (2018) En route into chloroplasts: preproteins' way home. Photosynth Res 138: 263-275 doi: 10.1007/s11120-018-0542-8.
  • Law YS, Ngan L, Yan J, Kwok LY, Sun Y, Cheng S, Schwenkert S, Lim BL (2018) Multiple kinases can phosphorylate the N-terminal sequences of mitochondrial proteins in Arabidopsis thaliana. Front Plant Sci 9: 982 doi: 10.3389/fpls.2018.00982.
  • Bölter, B, Seiler, F, Soll, J (2018) Analysis of Arabidopsis thaliana growth behavior in different light qualities. J Vis Exp 132: e57152 doi: 10.3791/57152.
  • Schwenkert S, Dittmer S, Soll J (2018) Structural components involved in plastid protein import. Essays Biochem 62: 65-75 doi: 10.1042/EBC20170093.
  • Pulido P, Zagari N, Manavski N, Gawronski P, Matthes A, Scharff LB, Meurer J, Leister D (2018) CHLOROPLAST RIBOSOME ASSOCIATED supports translation under stress and interacts with the Ribosomal 30S subunit. Plant Physiol 177: 1539-1554 doi: 10.1104/pp.18.00602.
  • Patil M, Seifert S, Seiler F, Soll J and Schwenkert S (2018) FZL is primarily localized to the inner chloroplast membrane however influences thylakoid maintenance. Plant Mol Biol 97: 421–433 doi: 10.1007/s11103-018-0748-3.
  • Chen YE, Yuan S, Lezhneva L, Meurer J, Schwenkert S, Mamedov F, Schroder WP (2018) The low molecular mass photosystem II Protein PsbTn is important for light acclimation. Plant Physiol 179: 1739-1753 doi: 10.1104/pp.18.01251.

2017

  • Teubner M, Fuß J, Kühn K, Krause K, Schmitz-Linneweber C (2017) The RNA recognition motif protein CP33A is a global ligand of chloroplast mRNAs and is essential for plastid biogenesis and plant development. Plant J 89: 472-485 doi: 10.1111/tpj.13396.
  • Thormählen I, Zupok A, Rescher J, Leger J, Weissenberger S, Groysman J, Orwat A, Chatel-Innocenti G, Issakidis-Bourguet E, Armbruster U, Geigenberger P (2017) Thioredoxins play a crucial role in dynamic acclimation of photosynthesis in fluctuating light. Mol Plant 10: 168-182 doi: 10.1016/j.molp.2016.11.012.
  • Sjuts I, Soll J, Bölter B (2017) Import of soluble proteins into chloroplasts and potential regulatory mechanisms. Front Plant Sci 8: 168 doi: 10.3389/fpls.2017.00168
  • Geigenberger P, Thormählen I, Daloso DM, Fernie AR (2017) The unprecedented versatility of the plant‎ thioredoxin system. Trends Plant Sci 22: 249-262 doi: 10.1016/j.tplants.2016.12.008.
  • Xu D, Leister D, Kleine T (2017) Arabidopsis thaliana mTERF10 and mTERF11, but not mTERF12, are involved in the response to salt stress. Front Plant Sci 14: 1213 doi: 10.3389/fpls.2017.01213.
  • Leister D, Wang L, Kleine T (2017) Organellar gene expression and acclimation of plants to environmental stress. Front Plant Sci 8: 387 doi: 10.3389/fpls.2017.00387.
  • Dann M, Leister D (2017) Enhancing (crop) plant photosynthesis by introducing novel genetic diversity.  Phil Trans Royal Soc B 372: 1730 doi: 10.1098/rstb.2016.0380.
  • Alagna F, Bellucci M, Leister D, Pompa A (2017) Editorial: Plastid proteostasis: relevance of transcription, translation, and post-translational modifications. Front Plant Sci 8: 1759 doi: 10.3389/fpls.2017.01759.
  • Zagari N, Sandoval-Ibañez O, Sandal N, Su J, Rodriguez-Concepcion M, Stougaard J, Pribil M, Leister D, Pulido P (2017) SNOWY COTYLEDON 2 promotes chloroplast development and has a role in leaf variegation in both Lotus japonicus and Arabidopsis thaliana. Mol Plant 10: 721-734 doi: 10.1016/j.molp.2017.02.009.
  • Ferrando A, Castellano MM, Lisón P, Leister D, Stepanova AN, Hanson J (2017) Editorial: Relevance of translational regulation on plant growth and environmental responses. Front Plant Sci 8: 2170 doi: 10.3389/fpls.2017.02170.
  • Ojeda V, Pérez-Ruiz JM, González MC, Nájera VA, Sahrawy M, Serrato AJ, Geigenberger P, Cejudo FJ (2017) NADPH thioredoxin reductase C and thioredoxins act concertedly in seedling development. Plant Physiol 174: 1436-1448 doi: 10.1104/pp.17.00481.
  • Legen J, Schmitz-Linneweber C (2017) Stable membrane-association of mRNAs in etiolated, greening and mature plastids. Int J Mol Sci 18:  E1881 doi: 10.3390/ijms18091881.
  • Rütgers M, Muranaka LS, Mühlhaus T, Sommer F, Thoms S, Schurig J, Willmund F, Schulz-Raffelt M, Schroda M (2017) Substrates of the chloroplast small heat shock proteins 22E/F point to thermolability as a regulative switch for heat acclimation in Chlamydomonas reinhardtii. Plant Mol Biol 95: 579-591 doi: 10.1007/s11103-017-0672-y.
  • Ries F, Carius Y, Rohr M, Gries K, Keller S, Lancaster CRD, Willmund F (2017) Structural and molecular comparison of bacterial and eukaryotic trigger factors. Sci Rep 6: 10680 doi: 10.1038/s41598-017-10625-2.
  • Rütgers M, Muranaka LS, Schulz-Raffelt M, Thoms S, Schurig J, Willmund F, Schroda M (2017) Not changes in membrane fluidity but proteotoxic stress triggers heat shock protein expression in Chlamydomonas reinhardtii.  Plant Cell Environ 40: 2987-3001 doi: 10.1111/pce.13060.
  • Smaczniak C, Muiño JM, Chen D, Angenent GC, Kaufmann K (2017) Differences in DNA binding specificity of floral homeotic protein complexes predict organ-specific target genes. Plant Cell 29: 1822-1835 doi: 10.1105/tpc.17.00145.
  • Zoschke R, Chotewutmontri P, Barkan A (2017) Translation and co-translational membrane engagement of plastid-encoded chlorophyll-binding proteins are not influenced by chlorophyll availability in maize. Front Plant Sci 28: 385 doi: 10.3389/fpls.2017.00385.
  • Scharff LB, Ehrnthaler M, Janowski M, Childs LH, Hasse C, Gremmels J, Ruf S, Zoschke R, Bock R (2017) Shine-dalgarno sequences play an essential role in the translation of plastid mRNAs in tobacco. Plant Cell 29: 3085-3101 doi: 10.1105/tpc.17.00524.
  • Meurer J, Schmid LM, Stoppel R, Leister D, Brachmann A, Manavski N (2017) PALE CRESS binds to plastid RNAs and facilitates the biogenesis of the 50S ribosomal subunit. Plant J 92: 400-413 doi: 10.1111/tpj.13662.

2016

  • Bölter B, Soll J (2016) Ycf1/Tic214 is not essential for the accumulation of plastid proteins. Mol Plant 10: 219-221 doi: 10.1016/j.molp.2016.10.012.
  • Bohne AV, Nickelsen J (2016) Metabolic control of chloroplast gene expression: an emerging theme. Mol Plant 10: 1-3 doi: 10.1016/j.molp.2016.08.002.
  • Leister D (2016) Photosynthesis: Complex flexibilities. Nat Plants 2: 16135 doi: 10.1038/nplants.2016.135.
  • Richter AS, Hochheuser C, Fufezan C, Heinze L, Kuhnert F, Grimm B (2016) Phosphorylation of GENOMES UNCOUPLED 4 alters stimulation of Mg chelatase activity in angiosperms. Plant Physiol 172: 1578-1595 doi: 10.1104/pp.16.01036.